Ovine (Texel) version 2.0 Genome Assembly: 289 kbp from OAR1:3,660,000..3,948,999

Browser Select Tracks Snapshots Custom Tracks Preferences

Search

Landmark or Region: Examples: OAR1:50000000..50900000, OAR10_3723681, NM_001076293.
Data Source Ovine (Texel) version 2.0 Genome Assembly	Scroll/Zoom: Flip

BLAST against the Ovine chromosomes on our server.
BLAST again the Ovine scaffolds.
Extract regions as fasta

Overview

Region

Details

Super Scaffolds

Scaffolds

Clear highlighting

<< Back to Browser Show Favorites Only

Clear All Favorites

Tracks

Generic Genome Browser version 2.14. For questions about the data at this site, please contact its webmaster. For support of the browser software only, send email to gmod-gbrowse@lists.sourceforge.net or visit the GMOD Project web pages.

Break:BCM20kb	Singlet:BCM20kb	Tail-Tail outsize:BCM20kb
Head-Head outsize:BCM20kb	Tail-Head outsize:BCM20kb	Tail-Tail:BCM20kb
Head-Head:BCM20kb	Tail-Head:BCM20kb

Break:BCM8kb	Singlet:BCM8kb	Tail-Tail outsize:BCM8kb
Head-Head outsize:BCM8kb	Tail-Head outsize:BCM8kb	Tail-Tail:BCM8kb
Head-Head:BCM8kb	Tail-Head:BCM8kb

Break (Sheep)	Singlet (Sheep)	Tail-Tail (Sheep)
Head-Head (Sheep)	Tail-Head (Sheep)	Tail-Tail outsize (Sheep)
Head-Head outsize (Sheep)	Tail-Head outsize (Sheep)

Break:Cow	Singlet:Cow	Tail-Tail outsize:Cow
Head-Head outsize:Cow	Tail-Head outsize:Cow	Tail-Tail:Cow
Head-Head:Cow	Tail-Head:Cow

1536 Pilot SNPs [?]	Illumina (Solexa) SNPs [?]	Roslin RAM SNPs (!! large dataset select regions < 2MB) [?]
454 SNPs [?]	Ovine SNP50 BeadChip SNPs [?]	SNPs interpolated [?]
BGI Ewe SNPs (!! large dataset select regions < 2MB) [?]	Ovine SNP50 BeadChip SNPs low match [?]

Ovine (Texel) version 2.0 Genome Assembly: 289 kbp from OAR1:3,660,000..3,948,999

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Custom Tracks

Assembly error [?]	Head-Head:Cow	Tail-Head:BCM20kb
Assembly error BCM [?]	Scaffolds	Tail-Head:BCM8kb
Head-Head (Sheep)	Sheep Markers	Tail-Head:Cow
Head-Head outsize (Sheep)	Super Scaffolds	Tail-Tail outsize (Sheep)
Head-Head outsize:BCM20kb	Tail-Head (Sheep)	Tail-Tail outsize:BCM20kb
Head-Head outsize:BCM8kb	Tail-Head outsize (Sheep)	Tail-Tail outsize:BCM8kb
Head-Head outsize:Cow	Tail-Head outsize:BCM20kb	Tail-Tail outsize:Cow
Head-Head:BCM20kb	Tail-Head outsize:BCM8kb
Head-Head:BCM8kb	Tail-Head outsize:Cow

Show grid	Image Width 640 800 1024 1280 1920 4096 7680	Highlight feature(s) (feature1 feature2...) Clear highlighting
Cache tracks		Highlight regions (region1:start..end region2:start..end) Clear highlighting
Show tooltips		Region Size (bp)