................................VCE 4.2.5.................................. Thu Feb 9 14:54:10 2006 page 1 ********************************************************************** * G E N E R A L I N F O R M A T I O N * ********************************************************************** VCE was started on : localhost.localdomain at Thu Feb 9 14:54:10 by : areverte Comments: _________ . ************************************************ . * VCE4 * . * version 4.2.5 * . * 08-Dec-1998 @ 07:38:14 * . * Linux 2.0.34 i586 * . * written by * . * Eildert Groeneveld * . * eg@tzv.fal.de * . ************************************************ Files involved: _______________ current directory : parameter file : vce.par data input file : vce.dat n =268820 pedigree input file : n = 0 log list file : L_vce.par binary parameter log : S_vce.par solutions file : vce.sol ********************************************************************** * D A T A I N F O R M A T I O N * ********************************************************************** General statistics: ___________________ traits # rec. min. max. avg. std. _________________________________________________________________ intens 268820 4.95420 15.99830 9.83307 2.02316 _________________________________________________________________ Pattern of Traits: __________________ The following frequencies were counted: intens COUNT ______________ x 268820 ______________ ********************************************************************** * P E D I G R E E I N F O R M A T I O N * ********************************************************************** ................................VCE 4.2.5.................................. Thu Feb 9 14:54:10 2006 page 2 Inbreeding # of animals _______________________________ 0 0 _____________________________ Average inbreeding : 0. (of inbred animals) Maximum inbreeding : 0. ********************************************************************** * C O V A R I A N C E M A T R I X I N F O R M A T I O N * ********************************************************************** The following (co)variance matrices will be estimated (starting values): ________________________________________________________________________ Resid.vce. intens .82 gene intens .82 gxab intens .82 gxdye intens .82 gxdiet intens .82 ________________________________________________________________________ Thus, optimization is in 5 dimensions. _______________________________________ ********************************************************************** * M O D E L I N F O R M A T I O N * ********************************************************************** Factor T nested # skp intens __________________________________ abd F 1344 x gene R 5659 x gxab R 71576 x gxdye R 11318 x gxdiet R 16977 x __________________________________ ................................VCE 4.2.5.................................. Thu Feb 9 14:54:21 2006 page 3 ********************************************************************** * C O E F F I C I E N T M A T R I X I N F O R M A T I O N * ********************************************************************** Setting up of equations: ________________________ # of equations : 106874 rank of system : 106874 # of nonzero coefficients (HS) : 1052420 fill of coefficient matrix : .009% # of NZE in factor : 1307333 Total storage required : 7268462 Total storage defined (total) : 80000000 CPU-time for solving (per rnd): 3.35 CPU-time for inverting (per rnd): .95 MFLOPs during factorization : 54.30 ********************************************************************** * M O D E L I N F O R M A T I O N * ********************************************************************** Factor T nested # skp intens __________________________________ abd F 1344 x gene R 5659 x gxab R 71576 x gxdye R 11318 x gxdiet R 16977 x __________________________________ ********************************************************************** * C O E F F I C I E N T M A T R I X I N F O R M A T I O N * ********************************************************************** Setting up of equations: ________________________ # of equations : 106874 rank of system : 106874 # of nonzero coefficients (HS) : 1052420 fill of coefficient matrix : .009% # of NZE in factor : 1307333 Total storage required : 7268462 Total storage defined (total) : 80000000 CPU-time for solving (per rnd): 3.35 CPU-time for inverting (per rnd): .95 MFLOPs during factorization : 53.46 ********************************************************************** * E S T I M A T E S I N F O R M A T I O N * ********************************************************************** Thu Feb 9 14:56:46 2006 CPU time used: 00:02:37 AG Log likelihood :-373365.8560 status : 1 at iteration: 36/ 36 The following covariance matrices were estimated: _________________________________________________ ................................VCE 4.2.5.................................. Thu Feb 9 14:56:46 2006 page 4 Resid.vce. intens .151 gene intens 3.134 gxab intens .516 gxdye intens .006 gxdiet intens .117 _________________________________________________ these are the corresponding ratios: ___________________________________ Resid.vce. intens .039 gene intens .799 gxab intens .131 gxdye intens .001 gxdiet intens .030 ___________________________________ Standard errors of ratios: __________________________ Resid.vce. intens 0.000 gene intens .002 gxab intens .002 gxdye intens 0.000 gxdiet intens 0.000 __________________________