................................VCE 4.2.5.................................. Wed Feb 8 15:30:45 2006 page 1 ********************************************************************** * G E N E R A L I N F O R M A T I O N * ********************************************************************** VCE was started on : localhost.localdomain at Wed Feb 8 15:30:45 by : areverte Comments: _________ . ************************************************ . * VCE4 * . * version 4.2.5 * . * 08-Dec-1998 @ 07:38:14 * . * Linux 2.0.34 i586 * . * written by * . * Eildert Groeneveld * . * eg@tzv.fal.de * . ************************************************ Files involved: _______________ current directory : parameter file : vce.par data input file : vce.dat n =178202 pedigree input file : n = 0 log list file : L_vce.par binary parameter log : S_vce.par solutions file : vce.sol ********************************************************************** * D A T A I N F O R M A T I O N * ********************************************************************** General statistics: ___________________ traits # rec. min. max. avg. std. _________________________________________________________________ intens 178202 4.95420 15.99830 10.60825 1.90325 _________________________________________________________________ Pattern of Traits: __________________ The following frequencies were counted: intens COUNT ______________ x 178202 ______________ ********************************************************************** * P E D I G R E E I N F O R M A T I O N * ********************************************************************** ................................VCE 4.2.5.................................. Wed Feb 8 15:30:45 2006 page 2 Inbreeding # of animals _______________________________ 0 0 _____________________________ Average inbreeding : 0. (of inbred animals) Maximum inbreeding : 0. ********************************************************************** * C O V A R I A N C E M A T R I X I N F O R M A T I O N * ********************************************************************** The following (co)variance matrices will be estimated (starting values): ________________________________________________________________________ Resid.vce. intens .72 gene intens .72 gxab intens .72 gxdye intens .72 gxdiet intens .72 ________________________________________________________________________ Thus, optimization is in 5 dimensions. _______________________________________ ********************************************************************** * M O D E L I N F O R M A T I O N * ********************************************************************** Factor T nested # skp intens __________________________________ abd F 1344 x gene R 3303 x gxab R 46122 x gxdye R 6606 x gxdiet R 9909 x __________________________________ ................................VCE 4.2.5.................................. Wed Feb 8 15:30:52 2006 page 3 ********************************************************************** * C O E F F I C I E N T M A T R I X I N F O R M A T I O N * ********************************************************************** Setting up of equations: ________________________ # of equations : 67284 rank of system : 67284 # of nonzero coefficients (HS) : 684189 fill of coefficient matrix : .015% # of NZE in factor : 868933 Total storage required : 4728262 Total storage defined (total) : 80000000 CPU-time for solving (per rnd): 1.93 CPU-time for inverting (per rnd): .56 MFLOPs during factorization : 66.30 ********************************************************************** * M O D E L I N F O R M A T I O N * ********************************************************************** Factor T nested # skp intens __________________________________ abd F 1344 x gene R 3303 x gxab R 46122 x gxdye R 6606 x gxdiet R 9909 x __________________________________ ********************************************************************** * C O E F F I C I E N T M A T R I X I N F O R M A T I O N * ********************************************************************** Setting up of equations: ________________________ # of equations : 67284 rank of system : 67284 # of nonzero coefficients (HS) : 684189 fill of coefficient matrix : .015% # of NZE in factor : 868933 Total storage required : 4728262 Total storage defined (total) : 80000000 CPU-time for solving (per rnd): 1.93 CPU-time for inverting (per rnd): .56 MFLOPs during factorization : 65.91 ********************************************************************** * E S T I M A T E S I N F O R M A T I O N * ********************************************************************** Wed Feb 8 15:33:12 2006 CPU time used: 00:02:28 AG Log likelihood :-206954.8850 status : 1 at iteration: 53/ 53 The following covariance matrices were estimated: _________________________________________________ ................................VCE 4.2.5.................................. Wed Feb 8 15:33:12 2006 page 4 Resid.vce. intens .176 gene intens 2.551 gxab intens .531 gxdye intens .003 gxdiet intens .142 _________________________________________________ these are the corresponding ratios: ___________________________________ Resid.vce. intens .052 gene intens .749 gxab intens .156 gxdye intens .001 gxdiet intens .042 ___________________________________ Standard errors of ratios: __________________________ Resid.vce. intens .001 gene intens .004 gxab intens .002 gxdye intens 0.000 gxdiet intens .001 __________________________